Browse of TCMCG007C09582 protein

CDS

Accession Number	TCMCG007C09582
gbkey	CDS
Protein Id	XP_033137964.1
Location	join(26464524..26464686,26464769..26464980,26465619..26465756,26465866..26466039,26466347..26466443,26466703..26466815,26466896..26467018,26467135..26467206,26467770..26467862,26468189..26468299,26468381..26468503,26468751..26468936,26469015..26469089,26469526..26469662,26469825..26469959,26470063..26470208,26470291..26470356,26470591..26470697,26470781..26470861,26470951..26471025,26471110..26471211,26471394..26471562,26471644..26471789,26471928..26472011,26472080..26472180,26472361..26472511,26472721..26472795,26472896..26473043,26473417..26474062,26474202..26474256,26474339..26474484,26474547..26474730,26474860..26474958,26475121..26475488,26475575..26475751,26475921..26476017,26476099..26476254,26476346..26476576,26476664..26476747,26476848..26476955)
Gene	LOC103845866
GeneID	103845866
Organism	Brassica rapa

Protein

Length	1917aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_033282073.1
Definition	rRNA biogenesis protein RRP5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGGCTCCATCGAGAAAAGTTCCAAGCGGAAAACGCAACGATTCAACAAAGGCATTCAAATCATCGAGGAAACCGTTCAAAAGGACGAAGAAGGACGATGTCGCCGCAAGGCCTGAAGCCATGGCTCTGCAGCTCGAAGAGGTTCCCGACTTCCCTCGAGGTGGAGGCTCTTCTCTGAGCAAGAAAGAGCGTGAGAAGATTCACGAAGAAGTCGACGCTGAGTTTGACGCTGGTGATGAGCGTGTTGCTAAGAGGAGTAAAGGAGGGAAACCTAAGAAGAGAAACACTAGCGATGTAGATGAATTGGGATCTCTTTTTGACGGTGGTTTAACTGGGAAACGGCCAAGATATGCTAATAAGATTACCATTAAGAATATTTCCGCCGGAATGAAGCTTTTGGGGGTTGTTACTGAAGTCAACCAGAAAGATATTGTAATTAGTCTTCCAGGGGGCTTACGTGGTTTAGTTCGCGCAAGCGAGGCGTTGGATTTTACAGATTTCGGAACTGAGGACGATGAAAATGAACTTCTTCGAGACATCTTTTCTGTGGGTCAGCTTGTTCCTTGCATTGTGTTGCAGTTAGATGATGATAAGAAGGAGGCGGGCAAAAGAAAAATATGGCTTTCATTGCGACTTTCCTTATTGCACAAGGGATTCAGTTTGGATTCCTTTCAACCTGGGATGGTAGTAACTGCAAATGTGAAAAGCGTGGAAGATCATGGTTATATCCTTCAATTTGGAATGCCTTCTATCACAGGATTTATCAAGAAAAGCCATGAAGGAACTCGGGAGTTAAAGACTGGGCAGCTTATTCAGGGCGTGGTTACAAATATTGATAAAGAACGTAAAATTGTTAGTCTTAGTTCTGACCCAGATTCAGTGGCAAAGTGTGTGACCAAGGATTTGAGTGGGATGTCGTTCGATCTTCTCATCCCAGGCATGATGGTTAATGCCCGTGTTCAATCTGCCCTTGAGAATGGATTACTATTAGGATTTCTTATGTACTTTACTGGAACGGTTGATCTTTTTCATCTACAAAATCCATTATGTAACAAGAGCTGGAAGGATGAATATAATCCGTCTAAGATGGTTAATGCTAGAATATTGTTTATCGATCCATCAACTAGAGCTGTTGGTTTGACGTTAAACCCACATCTTGTTGGCAACAAGGCTCCTCCTCTGCATGTCTCCAGCGGAGACATATTCGACGAAGCAAACGTTGTCCGTGTTGATAAATCAGGCCTTCTTCTTGAGCTCCCTTCTAAGCCTGTTTCAACGCCAGCATATGTTAGCACATATGACGCTGCTGAAGATGAAGTTAAGAAACTTGAAAAGAAGTTTAAGGAAGGAAGCCGCATCCGTGTTCGAGTCCTCGGCCTTAAGCAGATAGAGGGGTTGGCCATAGGGACTTTAAAGGAAAGCGCCTTTGAAGGTCCAGCGTTCACCCACTCAGATGTCAAGCCTGGCATGGTGACGAAGGGTAAAGTCATATCTGTTGATACATTCGGTGCCATTGTGCAATTTCCGGGTGGTCTGAAAGCAATGTGCCCACTTCAGCATATGTCTGAGTTTGAAGTTAGGAAGCCCAGGAAGAAGTTCAAGGTTGGAGCTGAATTAATATTTCGTGTGCTGGGCTGCAAATCAAAGAGAATAACTGTTACCTGCAAGAAAACACTTGTTAAGTCTAAACTTCCGATTTTGTGTTCTTACGCTGATGCAACTGAAGGACTAGTGACACATGGCTGGATAACAAAGATTGAAAAGAATGGATGCTTTGTTCGCTTCTATAATGGAGTGCAAGGATTTGTTGCCAGATTTGAACTTGGTTTAGAGCCTGGAAGTGATCCCGCTTCAGTGTTTCATATTGGGGAGGTTGTGAAATGTAGAGTTACCAGTGCGGTTCATGGTACTCGAAGGATCAACCTCAGTTTTATGATGAAGCCAACAAGCGTTTCTGAAGACGATTCAATCAAGTTAGGTAGTATTGTATCTGGGGTAATTGATAGTATAACTCCTCAGGCAGTCACTGTCCATGTTAAATCCAAAGGTCTTCTGAAGGGTACAATTTTTGCAGAACATTTAGCTGATCATCATGACCAAGCAAAATTAATGATATCACTTTTAAGACCTGGATTTGAGCTTGATAAGCTGCTGGTAATAGACATTGAAGGCAATAACCTGGCTCTCTCCTCAAAATATTCTCTCATCAAGTTTGCTGAAGAGCTCCCTTCGGATTTAAGTCAGCTCCAGCCAAACTCAGTGGTTCATGGTTATGTTTGTAACCTGATTGAGAATGGCTGTTTCGTCCGTTTCCTGGGTCGGTTGACTGGTTTCGCCCCGAGAAGCAAGGCAATTGACGAACCCAGGGCAGATCTCTCAGAATCCTTCTTTGTTGGACAATCGGTTCGGGCTAATATAGTTGATGTCAATCAAGAAAAAAGCAGGGTGACTCTTTCATTGAAACAGTCATCTTGTGCTTCTGTAGATGCTTCTTTTGTTCAAGAGTATTTCCTTACAGATGAGAAGATCTCGAACCTGCAATCATCTGATATTACTGAAAGCGAGTGTAGCTGGGTTGAGAAATTCTCTATTGGGAGTTTGATCATGGGAACCGTACAGGATAAAAATGACCTTGGTTTGGTGGTGAATTTTGACAATATTAATAATGTCCTTGGTTTTATACCTAAGTATCATTTGGGTGGAACTAGTTTGGAAAACGGCTCTGTTGTCCAAGCAGTTGTTCTTGATATTTCTAGGGCAGAGAGACTAGTTGATTTGTCTTTGAGGCCTGAGCTCATAAACAGCTCAGCCAAAGAGGTGTCCAACCGTCAGTCAAAAAAGAAACGTAAAAGAGGTATTTCCAAGGAACTTGAAGTCCACCAGAGGGTCAGCGCTGTTGTAGAGATTGTGAAGGAGCAATACTTGATTTTGTCGATTCCAGAACATAATTACACTATTGGATATGCGGCAGTATCAGACTATAACACACAGAAGTTACCAGTGAAACAGTTTACCACTGGACAAAGTGTTGTTGCGTCTGTTGAGGCTCTGCAAAACCCTTTGACGTCCGGGAGGTTGCTTTTACTTCTTGACTCTGTTTCCGGTAGTTCTGAGACATCGTCTAAGAGGGCAAAGAAGAAAGCCAATTGTGAAGTTGGTTCTGTTGTCCAAGCCGAGATTACTGAAATTAAGCCTTTTGAAGTAAGAGTAAACTTTGGCCAAAGTTTCCGAGGAAGAATCCACATAACGGAGGTGAATGATGTTGGTACAAATGAAGAACCTTTTGCCAAATTCAGAGTTGGGCAATCAGTGTCTGCAAGGGTTGTTGCAAAGCCCTGTCATACGGATAATAAAAAGAGTCAACTCTGGGAGCTTTCTGTAAAGCCTGCAATACTTAGAGACTCTGGTGAGCTGACTGAAGTGAGGGAACAACTTGAGTTTGTTTCTGGAGAGCCTGTCTGCGGATATGTCTACAAAGTGGATAAAGAATGGGTTTGGTTGGCAATATCTCGCAATGTGACTGCACGCATATTCATTTTAGACACTGCATGCGAAGCTCGTGAACTTGAGGAGTTCGAGGGGCGTTTTCCCATTGGTAAAGCTGTATCAGGCTATGTTTTGACGTACAATAAAGAGAAGAAAACTGTACGGTTGGTTCAGCGTCCACTACTGAATATCCAGAAAAGCATTGGCAATGATGGAGGGCCTAAAAAGGATAAACTAGACAGTAGCATTCCCGGTGATGATGCTACTCTATTCATTCATGAAGGAGACATTTTGGGTGGAAGAATTTCTAAGATACTTCCTGGTGTTGGTGGACTTCGTGTGCAAATAGGTCCTTATGTGTTTGGGAGAGTTCACTTTACTGAAATCAATGATTCATGGCTCTCCAATCCATTAGATGGTCTTCATGAAGGCCAATTTGTCAAATGCAAGGTCTTAGAAATCAGCAATTCTAGTAAAGGGACTTTGCAAATTGAACTGTCATTACGGACATCACTAGATGGCATGAGTTCGGACCATATCTCAGAAGCTTCCAGTAATAATGTTTTCAAGCGTTTTGAAAGGATTGAAGATCTTTCTCCTGATATGGGAATCGAGGGTTATGTCAAGAATACGATGTCAAAAGGTTGTTTTATCATGCTTTCAAGAACACTCGACGCAAAAGTTCTACTGTCAAATTTATCTGACACTTTTGTCAAGGATCCCGAAAATGAATTTCCAGTAGGAAAACTTGTCACTGGCAGGGTGTTAAATGTGGAGCCGTTATCGAAGCGGGTAGAAGTCACTTTGAAGAAAGTAAATGCTGGTGGGCCATCAAAATCTGAATCTTATGACCTGAAGCAGTTCCATGTTGGAGACATGATTTCTGGGAGAATCAAACGTGTGGAGCCCTATGGCTTGTTCATTGAAATAGACCAAACGGGCATGGTTGGATTATGTCATAAATCACAACTTTCTGATAATCATATCGAGGATATACATGCCAGATATGAAGCTGGGGAAAGCGTCACCGCAAAGATTTTAAAGCTGGACGAGGAAAGGCGACGTATATCGCTTGGGATGAAGAGTTCGTATTTTGTGAACGGCGATGATGACACGGCACAGCCACGTTCTGAAGAAAACGCTGATGAAGCCAGCATGGAGTGTGATCCAATCAATGATTCGAAGTCGGGAGTTCTTGCAGCAGTTGGTGATTTTGGGTTCCAGGAAACAAACAGTGGCACTTCTCTGGCTATTGCCCAAGTAGAGTCAAGGGCTTCTATCCTTCCGCTTGAAGTTGACCTTGACGACATTGAGGAGGCGGACCTTGACAAGAATCAAAATCAGAAACTACAGGGAGCCGATAAAGATGAAAAGAGCAAGAGAAAGGAAAAACAAAAAGACAAGGAGGAAAGAGAGAAAAAGATACAAGCTGCTGAAGGAAGATTGCTGGAGAATCACGCTCCTGAGAGTGCTGATGAATTTGAGAAAATGGTTAGAAGCTCTCCAAATAGCAGCTTTGTCTGGATTAAGTATATGGCGTTCATGCTCAGCTTGGCTGATATTGAGAAAGCCAGGTCCATTGCTGAGAGGGCTTTGAGAACTATAAATATTCGTGAAGAAGAAGAGAAGCTAAACATATGGGTTGCATACTTCAATTTGGAAAATGAACATGGAAGTCCTCCAGAGGAAGCTGTAAAGAAAGTTTTTGAAAGAGCGCGTCAATACTGTGACCCGAAGAAAGTTTACAATGCCCTCTTGGGCGTGTACGAGAGAACAGAGCAATATAAATTGGCTGATAAGCTGCTTGATGAGATGATCAAGAAGTTCAAGCAATCCTGCAAGGTTTGGTTACGGAAGATACAAAGTTATCTAAAGCAAGACGAGGAAAACATTCAGTCGGTGGTGAACCGTGCCTTGTTATGTCTTCCGCGCCATAAGCACATTAAATTCATATCGCAAACGGCTATTCTTGAGTTTAAATGCGGAGTTGCAGACAGAGGGAGATCACTGTTTGAAGGCGTTCTTAGGGAGTACCCGAAAAGAACAGACTTGTGGAGTGTTTATCTTGACCAGGAGATCCGGTTGGGAGAAGTTGATGTGATTAGGTCTTTGTTCGAGAGAGCCATTAGCTTGAGTTTGCCTCCTAAGAAGATGAAGTTTTTATTTAAGAAGTTTTTGGAATATGAGAAGGCTGCTGGTGACGAAGAGAGAGTCGAGTACGTGAAGCAAAGAGCAATGGAGTATGCAGACAGTACCTTGGCCTGA

Protein:   MVAPSRKVPSGKRNDSTKAFKSSRKPFKRTKKDDVAARPEAMALQLEEVPDFPRGGGSSLSKKEREKIHEEVDAEFDAGDERVAKRSKGGKPKKRNTSDVDELGSLFDGGLTGKRPRYANKITIKNISAGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEALDFTDFGTEDDENELLRDIFSVGQLVPCIVLQLDDDKKEAGKRKIWLSLRLSLLHKGFSLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEGTRELKTGQLIQGVVTNIDKERKIVSLSSDPDSVAKCVTKDLSGMSFDLLIPGMMVNARVQSALENGLLLGFLMYFTGTVDLFHLQNPLCNKSWKDEYNPSKMVNARILFIDPSTRAVGLTLNPHLVGNKAPPLHVSSGDIFDEANVVRVDKSGLLLELPSKPVSTPAYVSTYDAAEDEVKKLEKKFKEGSRIRVRVLGLKQIEGLAIGTLKESAFEGPAFTHSDVKPGMVTKGKVISVDTFGAIVQFPGGLKAMCPLQHMSEFEVRKPRKKFKVGAELIFRVLGCKSKRITVTCKKTLVKSKLPILCSYADATEGLVTHGWITKIEKNGCFVRFYNGVQGFVARFELGLEPGSDPASVFHIGEVVKCRVTSAVHGTRRINLSFMMKPTSVSEDDSIKLGSIVSGVIDSITPQAVTVHVKSKGLLKGTIFAEHLADHHDQAKLMISLLRPGFELDKLLVIDIEGNNLALSSKYSLIKFAEELPSDLSQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDEPRADLSESFFVGQSVRANIVDVNQEKSRVTLSLKQSSCASVDASFVQEYFLTDEKISNLQSSDITESECSWVEKFSIGSLIMGTVQDKNDLGLVVNFDNINNVLGFIPKYHLGGTSLENGSVVQAVVLDISRAERLVDLSLRPELINSSAKEVSNRQSKKKRKRGISKELEVHQRVSAVVEIVKEQYLILSIPEHNYTIGYAAVSDYNTQKLPVKQFTTGQSVVASVEALQNPLTSGRLLLLLDSVSGSSETSSKRAKKKANCEVGSVVQAEITEIKPFEVRVNFGQSFRGRIHITEVNDVGTNEEPFAKFRVGQSVSARVVAKPCHTDNKKSQLWELSVKPAILRDSGELTEVREQLEFVSGEPVCGYVYKVDKEWVWLAISRNVTARIFILDTACEARELEEFEGRFPIGKAVSGYVLTYNKEKKTVRLVQRPLLNIQKSIGNDGGPKKDKLDSSIPGDDATLFIHEGDILGGRISKILPGVGGLRVQIGPYVFGRVHFTEINDSWLSNPLDGLHEGQFVKCKVLEISNSSKGTLQIELSLRTSLDGMSSDHISEASSNNVFKRFERIEDLSPDMGIEGYVKNTMSKGCFIMLSRTLDAKVLLSNLSDTFVKDPENEFPVGKLVTGRVLNVEPLSKRVEVTLKKVNAGGPSKSESYDLKQFHVGDMISGRIKRVEPYGLFIEIDQTGMVGLCHKSQLSDNHIEDIHARYEAGESVTAKILKLDEERRRISLGMKSSYFVNGDDDTAQPRSEENADEASMECDPINDSKSGVLAAVGDFGFQETNSGTSLAIAQVESRASILPLEVDLDDIEEADLDKNQNQKLQGADKDEKSKRKEKQKDKEEREKKIQAAEGRLLENHAPESADEFEKMVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYNALLGVYERTEQYKLADKLLDEMIKKFKQSCKVWLRKIQSYLKQDEENIQSVVNRALLCLPRHKHIKFISQTAILEFKCGVADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKAAGDEERVEYVKQRAMEYADSTLA